Seminar & Learning Tools Archive
The CCTSI's Translational Informatics core has created this video and podcast library to help investigators learn more about informatics.
Bioinformatics
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Jump Start Your Career with Bioinformatics, Part 1
David Kao (Video: 6 minutes)
Jump Start Your Career with Bioinformatics, Part 2
David Kao (Video: 8 minutes)
Jump Start Your Career with Bioinformatics, Part 3
David Kao (Video: 7 minutes)
Jump Start Your Career with Bioinformatics, Part 4
David Kao (Video: 7 minutes)
Bioinformatics: From Lab Bench Sciences to the Public
Tzu Phang, PhD (Video: 25 minutes)
Data Management & Informatics
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REDCap
Linda Carlin, PhD and Jessica Bondy, MHA (Video: 7 minutes)
Research Form Design: Best Practices
Swan Ellert, Linda Carlin, Umit Kaya, Jessica Bondy (Video: 9 minutes)
Research Forms: Choosing the Technology to Collect your Data
Swan Ellert, Linda Carlin, Umit
Kaya, Jessica Bondy
Merging Files
Pam Wolfe, Jessica Bondy, Linda Carlin; Narrated by Ben Shulman (Video: 10 minutes)
Managing Your Research Data
Linda Carlin, PhD (Video: 8 minutes)
Why not use Excel for data management?
Linda Carlin, PhD (Video: 7 minutes)
Virtual Data Warehouse: Making Multi-Site Research more Efficient
Heather Tave (Seminar Video: 1 hour, 8 minutes)
Quality Improvement & Informatics
Robert M. Wachter, MD; Daniel Hyman, MD, MMM; Ida Sim, MD, PhD
(Seminar Video: 2 hours, 56 minutes)
REDCap, Study Data Management, Best Practices
Linda Carlin, PhD (Seminar Video: 49 minutes)
Data Issues with Large-Scale Genetic Studies
Matt McQueen, PhD (Seminar Video: 1 hour, 10 minutes)
REDCap: Collecting, Storing, and Accessing Data Online
Sean Banks, MS (ABD) (Seminar Video: 59 minutes)
REDCap Tutorial, 5x5 Ideas, Clinical Investigation Shared Resource, Clinical Informatics is a Subspecialty (Transcript)
Steve Ross (Podcast MP3, ~7 minutes, 10.3 MB)
Culture of Data Conference, TT@TTT, CTRCs, What's New in Informatics - EHR Milestones (Transcript)
Addie Fletcher (Podcast MP3, ~6 minutes, 8.93 MB)
Translational Informatics Educational Videos, Do You Want to Help?, Informatics Services Help Desk, Flink and Biomart (Transcript)
Michael Kahn (Podcast MP3, ~6 minutes, 8.30 MB)
REDCap, LigerCat, DISC, Developmental & Informatics Services Center (Transcript)
(Podcast MP3, ~4 minutes, 5.19 MB)
What is Translational Informatics? (PDF)
Learn Informatics - MOOC, Informatics News, Research Match, Amazon's Mechanical Turk (Transcript)
Dr. Aik Choon Tan (Podcast MP3, ~10 minutes, 14.6 MB)
Datapalooza 2012, Colorado Translational Informatics Community, SeDLAC, Hospitals Go Wireless (Transcript)
Dr. Robert Dellavalle (Podcast MP3, ~8 minutes, 11.7MB)
CCTSI Informatics' Consultation and Data Analysis Service, Ancestry.com, Natural Language Processing in Bulgaria (Transcript)
Kevin Cohen, PhD (Podcast MP3, ~7 minutes, 11.5 MB)
SAFTINet, TT@TTT, CTRCs, What's New in Informatics - Big Data Initiative (Transcript)
Ken Jones (Podcast MP3, ~8 minutes, 11.5 MB)
REDCap Tutorials, 5x5s, CTRCs, ONC Challenge (Transcript)
Larry Hunter (Podcast MP3, ~11 minutes, 10.1 MB)
REDCap, CCTSI Navigators, PubMed (Transcript)
(Podcast MP3, ~7 minutes, 10.9 MB)
HeartSmartKids: Minimally-Invasive Informatics for Addressing Childhood Cardiovascular Risks in Clinic and Community
Kevin Gilbert, PhD and
Lynn Gilbert, RN, PhD (Seminar Video: 1 hour, 11 minutes)
Study Design by Metadata (SDM): A system for collecting clinical research data
Ted Wade, PhD and Jeff Magouirk, MS (Seminar Video: 1 hour, 3 minutes)
Reading Less: How to Put Yourself on an Information Diet
Addie Fletcher, MLIS (Video: 6 minutes)
Informatics Year in Review: 2009
Michael Kahn, MD, PhD (Seminar Video: 1 hour)
Informatics Year in Review: 2008 (Slides)
Michael Kahn, MD, PhD (Seminar Video: 1 hour, 7 minutes)
Genomics and Microarrays
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Genome Browsers
Addie Fletcher, MLIS (Video: 6 minutes)
Array Comparative Genomics Hybridization (aCGH)
Tzu Phang PhD (Video: 3 minutes)
EpiGenomics
Tzu Phang PhD (Video: 4 minutes)
Alternative Splicing Array Technology
Tzu Phang PhD (Video: 5 minutes)
ChIP: Chromatin Immunoprecipitation on a Chip
Tzu Phang PhD (Video: 3 minutes)
mRNA Expression Technology
Tzu Phang PhD (Video: 4 minutes)
Applications of Personal Genomics
Steve Johnson (Seminar Video: 50 minutes)
i2b2 and Accelerating Translational Research
Deb Batson and David Kao, MD (Seminar Video: 57 minutes)
Defining a Core Human Microbiome
Rob Knight, PhD (Seminar Video: 1 hour, 12 minutes)
Grant Administration
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Care and Feeding of Your Grant, Part 1
Diane Fairclough, PhD (Video: 17 minutes)
Care and Feeding of Your Grant, Part 2
Diane Fairclough, PhD (Video: 13 minutes)
Health Registries & Resources
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Virtual Health Care: Using the Electronic Medical Record for Physician-Physician and Patient-Physician Communication
Ted E. Palen, PhD, MD,
MSPH (Seminar Video: 1 hour, 8 minutes)
National Registry System for Rare Diseases
Umit Kaya and Rick Shearer (Seminar Video: 54 minutes)
Musing of Meaningful Use: Implications for Health Reform and Research
Arthur Davidson, MD, MSPH (Seminar Video: 1 hour, 10 minutes)
Measuring Behavior Beliefs: Current Status & Future Directions of the Behavioral Medicine Core Lab
Fred Wamboldt, MD (Seminar
Video: 1 hour, 11 minutes)
Registries and Population Care at Kaiser Permanente Colorado
Jennifer Baja, MD, MPH and John Merenich, MD, FACP, FNLA (Seminar
Video: 1 hour, 30 minutes)
Improving Readability of Electronic Health Records
CT Lin, MD, FACP (Seminar Video: 1 hour)
Mt. Sinai Enterprise Data Repository
Steve Ellis (Seminar Video: 1 hour, 24 minutes)
Self-Service Research Data Integration at National Jewish Health
Ted Wade (Seminar Video: 1 hour, 15 minutes)
Denver Health's Data Warehouse and Its Use in Quality Improvement and Clinical Research
Allison Sabel, MD, PhD, MPH, CMQ (Seminar Video: 1
hour)
Development of an Open Source Application for Local Health Departments (Seminar Video: Slides)
Joe Schreurs (Seminar Video: 1 hour, 24 minutes)
American Recovery and Reinvestment Act (ARRA) and the Colorado Regional Information Organization (CORHIO)
Carrie Book , BBA, PMP (Seminar Video:
45 minutes)
Personal Health Records: Tethered and Interoperable (Google Health and Microsoft Health Vault)
Steve Ross, MD (Seminar Video: 1 hour, 5 minutes)
DARTNet: A Distributed Network for Research and Quality Improvement
Wilson Pace, MD (Seminar Video: 1 hour, 2 minutes)
Biomedical Discovery Acceleration
Lawerence Hunter, PhD (Seminar Video: 59 minutes)
RHIOS: CORHIO and Challenges in Implementing RHIOs
Arthur Davidson, MD, MSPH (Seminar Video: 1 hour, 11 minutes)
Ensembl Genome Browser Training, Informatics News (Transcript)
(Podcast MP3, ~8 minutes, 10.9 MB)
Regulatory Compliance Role Playing, Informatics News, Clinical Investigation Shared Resource, NIH Molecular Biology Tools (Transcript)
Ted Wade (Podcast MP3, ~9 minutes, 8.24 MB)
Evidence Based Health Care (EBHC), JAMIA Journal Club, PACT (Transcript)
(Podcast MP3, ~5 minutes, 7.04 MB)
TT@TTT, Baseline, What's New (Transcript)
(Podcast MP3, ~5 minutes, 8.20 MB)
Regulatory Compliance
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Regulatory Compliance: What you need to know
Tim McCain (Video: 8 minutes)
Privacy Protecting Data Mining
Rinku Dewri (Seminar Video: 1 hour, 22 minutes)
SAFTINet: Scalable Architecture for Federated Translational Inquiries
Lisa Schilling, MD, MSPH (Seminar Video: 1 hour, 1 minute)
Using Health Information Technology to Improve Clinical Care
Ted Palen, MD, PhD (Seminar Video: 1 hour, 15 minutes)
Creation of a HIPAA-Compliant integrated network for collecting and using patient information for research: University of Pittsburgh's Honest Broker System
Dana Marie Grzybicki, MD, PhD (Seminar Video: 59 minutes)
Social Media & Networking
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Researcher Networking
Addie Fletcher, MLIS (Video: 5 minutes)
Using Social Networking Sites for Medical Research Recruitment
Adelaide Fletcher (Video: 5 minutes)
Are You Ready for Social Media? Social Media's Role in the Transformation of Healthcare
Diane J. Skiba, PhD, FAAN, FACMI (Seminar Video: 1
hour)
The Internet: Changing Biomedical Publication and Scientific Discourse
Robert Dellavalle, MD, PhD, MSPH (Seminar Video: 1 hour, 13 minutes)